HPCC How to Install Conda

How To Install Conda

To Install Conda on HPCC

Following the below code will automatically install conda on the HPCC. For more information, check out the link here.

#  Running the following script will automate the process of installing a local copy of Miniconda v3
/lustre/work/examples/InstallPython.sh

#  Once complete you will need to run the following commands before you can actually use the new environment you created.
. $HOME/conda/etc/profile.d/conda.sh
conda activate

Once you install conda on the HPC. You need to add the 1 of the 2 choices below to your .bashrc file in order activate conda automatically when you login to the HPC. Choice 1 is the simplier option compared to choice 2 which includes some error checking but causes issues when others try to source your conda environment. You will need to replace $USER with your eraider.

Choice 1 - Simplier Conda Activation

source /home/$USER/conda/etc/profile.d/conda.sh
export PATH=/home/$USER/conda/bin:$PATH
conda activate

Choice 2 - Error Checking Conda Activation

# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$('/home/$USER/conda/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
    eval "$__conda_setup"
else
    if [ -f "/home/$USER/conda/etc/profile.d/conda.sh" ]; then
        . "/home/$USER/conda/etc/profile.d/conda.sh"
    else
        export PATH="/home/$USER/conda/bin:$PATH"
    fi
fi
unset __conda_setup
# <<< conda initialize <<<

To Install Conda Locally

Follow Conda instructions for your operating system.

• Linux
• Mac
• Windows